Add JSON files for skill nodes and edges in graphify cache

- Created a new JSON file for the "run-prompt" skill, including nodes and edges that represent various skills and their relationships.
- Added a new JSON file for the "prompt-writer" skill, detailing its nodes and edges, capturing the structure and flow of the skill components.

graphify-out/manifest.json

@@ -2155,13 +2155,13 @@
     "semantic_hash": ""
   },
   ".claude/skills/prompt-writer/SKILL.md": {
-    "mtime": 1781361052.5047913,
-    "ast_hash": "5fa7cadf0c63c38993defe48cdcf3301",
+    "mtime": 1785139419.777099,
+    "ast_hash": "cf5bf4eb1250d881ee5a50a95d243a5b",
     "semantic_hash": ""
   },
   ".claude/skills/run-prompt/SKILL.md": {
-    "mtime": 1781176103.4828885,
-    "ast_hash": "1f55406abf6bd5bbf1fa7afa28ade736",
+    "mtime": 1785139494.516375,
+    "ast_hash": "b446729b9310532b7ddc64ff75709605",
     "semantic_hash": ""
   },
   "CLAUDE.md": {
@@ -6498,5 +6498,10 @@
     "mtime": 1784992595.453929,
     "ast_hash": "7da702e9103eb324b16faaa4ffacc0d6",
     "semantic_hash": ""
+  },
+  ".claude/guidelines.md": {
+    "mtime": 1785139128.796319,
+    "ast_hash": "ca7b75563a3bf642c8e37010212d1e16",
+    "semantic_hash": ""
   }
 }